Linker for mappings


(Tracy Safran) #1

I have multiple medical terminologies loaded in Stardog - such as Gene Ontology and NCI Thesaurus. I also have a metadata ontology loaded that specifies the identifier, label and definition of each of the loaded medical terminologies. Would I be able to use linker to build mappings between these terminologies - i.e. find synonymous entries?

The metadata ontology looks like this:

<http://www.geneontology.org/GO> rdfs:subClassOf _:genid14 .

_:genid14 a owl:Restriction ;
owl:onProperty :has_preferred_term ;
owl:someValuesFrom rdfs:label .

......

<http://purl.bioontology.org/ontology/MedDRA> rdfs:subClassOf _:genid11 .

_:genid11 a owl:Restriction ;
owl:onProperty :has_preferred_term ;
owl:someValuesFrom skos:prefLabel .


(zachary.whitley) #2

I don't think there's any reason that you couldn't use the linker through the SPARQL service. https://www.stardog.com/docs/#_sparql


(system) #3

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