I added a database as a virtual graph and can query fine. I tried to export the mappings to refine them manually (is this the recommended path?) using the command
The generated mappings may include RefObjectMap representing a foreign key relationship. These can currently only be exported using the R2RML format. Try adding the -f r2rml argument to your mappings command.
If there are too many mappings for the CLI to return them, your only choice at that point is to make an HTTP call to /admin/virtual_graphs/{myVGName}/mappings via cURL, Postman, etc.